Galloway AWE, Brett MT, Holtgrieve GW, Ward EJ, Ballantyne AP, Burns CW, et al. A Fatty Acid Based Bayesian Approach for Inferring Diet in Aquatic Consumers. PLoS ONE 10(6): e0129723. doi:10.1371/journal.pone.0129723, 2015.

Brahney, J., Mahowald, N., Ward, D.S., Ballantyne, A., Neff, J.C. (2015) Atmospheric phosphorus pollution alters global alpine lake stoichiometry. Global Biogeochemical Cycles, 2015. 

Smith, W.K., Reed, S.C., Cleveland, C.C., Ballantyne, A.P., Anderegg, W.R.L., Wieder, W.R., Liu, Y.Y., Running, S.W., 2015. Large divergence of satellite and Earth system model estimates of global terrestrial CO2 fertilization. Nature Climate Change.

Reed C. L., M.L. Loik, Water relations and photosynthesis along an elevation gradient for Artemisia tridentata during an historic drought.  Oikos. 2016.

William R. L. Anderegg, Ashley P. Ballantyne, W. Kolby Smith, Joseph Majkut, Sam Rabin, Claudie Beaulieu, Richard Birdsey, John P. Dunne, Richard A. Houghton, Ranga B. Myneni, Yude Pan, Jorge L. Sarmiento, Nathan Serota, Elena Shevliakova, Pieter Tan and Stephen W. Pacala. "Tropical nighttime warming as a dominant driver of variability in the terrestrial carbon sink." Proceedings of the National Academy of Sciences, DOI: 10.1073/pnas.1521479112

Ballantyne, A. P., Andres, R., Houghton, R., Stocker, B. D., Wanninkhof, R., Anderegg, W., Cooper, L. A., DeGrandpre, M., Tans, P. P., Miller, J. B., Alden, C., and White, J. W. C.: Audit of the global carbon budget: estimate errors and their impact on uptake uncertainty, Biogeosciences, 12, 2565-2584, doi:10.5194/bg-12-2565-2015, 2015.

Oyler, J. W., S. Z. Dobrowski, A. P. Ballantyne, A. E. Klene, and S. W. Running. Artificial amplification of warmingtrends across the mountains of thewestern United States, Geophys. Res. Lett.  2015.

Brahney, J.,  A. P. Ballantyne, P. Kociolek, P. R. Leavitt, G. L. Farmer, J. C. Neff.  Ecological changes in two contrasting lakes associated with human activity and dust transport in western Wyoming. Limnology and Oceanography. 2015.

Oyler, J.W., A.P., Ballantyne, K. Jencso,M. Sweetb, S. W. RunningaCreating a topoclimatic daily air temperature dataset for the conterminous United States using homogenized station data and remotely sensed land skin temperature. International Journal of Climatology. 2014.

Fan, Z., J. C. Neff, M.P. Waldrop, A.P. Ballantyne, M. R. Turetsky.  Transport of oxygen in soil pore-water systems: implications for modeling emissions of carbon dioxide and methane from peatlands. Biogeochemistry. 2014.

Bowling, D.R, A. P. Ballantyne, J. B. Miller, S. P. Burns, T. J. Conway, O. Menzer, B. B. Stephens, B. H. Vaughn. Photosynthetic response to environmental factors dominates the 13C land disequilibrium in a Rocky Mountain subalpine forest. Global Biogeochemical Cycles. 2014.

Brahney J. , A.P. Ballantyne, B.L. Turner , S.A. Spaulding, M. Otu, J.C. Neff.  Separating the influences of diagenesis, productivity and anthropogenic nitrogen deposition on sedimentary d15N variations. Organic Geochemistry. 2014.

Brahney, J*., Ballantyne, A.P., Neff, J.C.  Increasing calcium deposition in the western US: the role of mineral aerosols.  Aeolian Research.  2013.

Ballantyne, A.P., Axford, Y.,  Otto-Bleisner, B., Miller, G., White, J.W.C.  Sensitivity of Arctic Pliocene climate to sea-ice.  Palaeogeography, Palaeoclimatology, Palaeoecology.  2013.

Ballantyne, A.P., Alden*, C., Miller, J.B., Tans, P.P., and White, J.W.C.  Increase in net land and ocean COuptake over the last 50 years. Nature. 2012.

Ballantyne, A.P., Miller, J.B., Tans, P.P., and White, J.W.C.  Novel applications of isotopes in atmospheric CO2 : what can atmospheric observations teach us about processes in the biosphere? Biogeosciences.  2011.

Ballantyne, A.P., Baker, P.A., Fritz, S., and Poulter, B.  Climate mediated carbon and nitrogen dynamics in a tropical watershed.  Journal of Geophysical Research-Biogeosciences.  2011.

Ballantyne, A.P., Baker, P.A, Villalba, R, Chambers, J.Q., and Argollo, J.  Regional differences in South American monsoon precipitation inferred from the growth and isotopic composition of tropical trees.  Earth Interactions. doi: 10.1175/2010EI277.1.  2011.

Ballantyne A.P., Brahney*, J., Fernandez, D, Lawrence, C.L, Saros, J, and Neff, J.C.  Biogeochemical response of alpine lakes to recent changes in dust deposition.  Biogeosciences. 7, 8723-8761, doi:10.5194/bgd-7-8723-2010.  2011.

Csank* A.Z., Tripati, A., Patterson, W.P., Eagle, R.A., Rybczynski, N., Ballantyne, A.P., and Eiler, J. Estimates of Arctic land surface temperatures during the early Pliocene from two novel proxies.  Earth and Planetary Science Letters.  2011.

Ballantyne, A.P., Miller, J.B., and Tans, P.P.  Apparent seasonal cycle in isotopic discrimination of carbon in the atmosphere and biosphere due to vapor pressure deficit.  Global Biogeochemical Cycles.  24, GB3018, doi:10.1029/2009GB003623.  2010.

Ballantyne, A.P., Greenwood, D.R, Sinninghe Damsté, J.S, Csank, A.Z, Eberle, J.J., and Rybczynski, N.  Significantly warmer Arctic surface temperatures during the Pliocene indicated by multiple independent proxies.  Geology.  v. 38, p. 603-606, doi:10.1130/G30815.1.  2010.

Vrede, T., Ballantyne, A.P., Lindblom, C.M., Algetsen, G.., Gudasz, C., Linbolm, S., and Blomquist, P. The effects of altered N:P ratios on primary productivity and N fixation in a eutrophic lake.  Freshwater Biology.  2009. 

Neff, J., Ballantyne, A.P., Lawrence, C., Painter, T., Reynolds, R.  Increase in eolian dust deposition to mountain ecosystems of the Southwestern, US.  Nature Geosciences.  2008. 

Fritz, S.C., Baker, P.A., Seltzer, G..O., Ballantyne, A.P., Tapia, P., Cheng, RH, and Edwards, L.  Quaternary glaciation and hydrologic variation in the South American tropics as reconstructed from the Lake Titicaca drilling project.  Quaternary Research.  2007.

Ballantyne, A.P., Rybczynski, N., Baker, P.A., Harington, C.R., White, D.  Pliocene Arctic temperature constraints from the growth rings and isotopic composition of fossil wood.  Palaeogeography, Palaeoclimatology, Palaeoecology.  2006. 

Brett, M.T., Müller-Navarra, D, Ballantyne, A.P., Ravet, J.L., and Goldman, C.R.  Daphnia fatty acid composition reflects that of their diet.  Limnology and Oceanography.  2006.

Ballantyne, A.P., Lavine, M., Baker, P.A., Crowley, T.J., and Liu, J.  Meta-analysis of tropical temperature estimates from the Last Glacial Maximum.  Geophysical Research Letters.  32(L05712).  2005. 

Müller-Navarra, D., Ballantyne, A.P., Brett, M.T., Chandra, S., and Goldman, C.R.  Unsaturated fatty acid content in seston and tropho-dynamic coupling in lakes.  Nature.  427: 69-72.  2003. 

Ballantyne, A.P., Brett, M.T., and Schindler, D.E. The importance of dietary phosphorus and highly unsaturated fatty acids for sockeye (Oncorhynchus nerka) growth in Lake Washington-a bioenergetics approach.  Canadian Journal of Fisheries and Aquatic Sciences.  60: 12-22. 2003.